2011 Front Neuroinform
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python
Gorgolewski K, Burns CD, Madison C, Clark D, Halchenko YO, Waskom ML, Ghosh SS
Nipype is a community-developed Python project providing a uniform interface to existing neuroimaging software (ANTS, SPM, FSL, FreeSurfer, Camino, MRtrix, MNE, AFNI, Slicer) and underpinning many popular pipelines including fmriprep. Pydra is a lightweight Python dataflow engine designed to succeed Nipype: reproducible, scalable workflows linking shell commands and Python functions.
- reproducibility-tooling
- neuroimaging-methods
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