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2022 journal original-research Nat Methods

TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models

Ciric R, Thompson WH, Lorenz R, Goncalves M, MacNicol EE, Markiewicz CJ, Halchenko YO, Ghosh SS, Gorgolewski KJ, Poldrack RA, Esteban O

Identifiers and access

DOI
10.1038/s41592-022-01681-2
PubMed
36456786
PMC
PMC9718663
PDF
Open-access copy →
Cited by
120

Key findings

TemplateFlow is an open database and software framework that catalogues and distributes human and non-human brain templates and atlases under FAIR principles, enabling multiverse analyses across references, scales, and species.

Abstract

Source: pubmed

Reference anatomies of the brain ('templates') and corresponding atlases are the foundation for reporting standardized neuroimaging results. Currently, there is no registry of templates and atlases; therefore, the redistribution of these resources occurs either bundled within existing software or in ad hoc ways such as downloads from institutional sites and general-purpose data repositories. We introduce TemplateFlow as a publicly available framework for human and non-human brain models. The framework combines an open database with software for access, management, and vetting, allowing scientists to share their resources under FAIR-findable, accessible, interoperable, and reusable-principles. TemplateFlow enables multifaceted insights into brains across species, and supports multiverse analyses testing whether results generalize across standard references, scales, and in the long term, species.

Topics

  • neuroimaging-methods
  • reproducibility-tooling

Lab authors

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